Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917434.1_cds_XP_016467033.1_59822
CDS Infomation

[gene=LOC107789690] [db_xref=GeneID:107789690] [protein=U-box domain-containing protein 34-like isoform X3] [protein_id=XP_016467033.1] [location=complement(join(55431..55631,55737..56483,57235..57663,57935..58036,58191..58429,58551..58672,58973..59088,59159..59227))] [gbkey=CDS]
Sequence

ATGGAGGATAAGAGGGCTCAATGTGAAGAAATCTTTATCCCATTTAAGATTTTGTGCAAA
AGAAAAAATGTTGAGACTTTGGTGCTGGAAGGGAATAATCCTGCGACTGTGCTACTAAAA
TATGTAAATGACTCTGGGATTAAAAGTTTAGTCTTGGGCTCTTACTCTCCCAATTACTTT
TCCAGGAAGCTGAAGGGATCAAGCGTGCCTTCAATTATCCTCAAGCATGCTCCAGAATGT
TGTGATGTTTATGTGGTGTCCTCAAATAAGCTAATGACAAATTCGTTAAATCCCTTATTG
GCTACTGAAGGTGATCTTCCTACAATCAATAAACAAAAATCCAGTGCATCTTCTGCCTCT
ATAGATGGTGTCTCTCACAGTAGATCATCATCCCTTGCATCGAGCCATCTGAATTTTCCA
GCATTTGTCGATGGGAACTCTTCTAATTATGTCACTCCTCAACACAGACCTAATCGAAAT
CTGGAAAATGTGACCACAGGTCTGGAGGCAGTGAAGGGATGTCATTCTTCCACTTACTCA
GAGCAGTTGGACATTCAAGAGGAAGTGGAGAGGGTGCGCCTAGAATTACAGACTACTTTA
GCAATGTACAATCAAACATGCGAAGACCTGATCCATACCCGAAACAAAGTCCAGTTATTT
TCTTCGCAATACCTTGAAGAGTCTGGAAAAGTGAATGCCGCCAAGAAAAGAGAAGAAAAC
CTAAGGAAAATTGCTGCTGAAGAGAAGGAGAAGCATATTGAAGCTGAGAAGGAGGTTGAG
ACAGCAAGAAAATTGCTTTCAGAAGAGACTTATGAGAGGCAGATAGCAGAGTTGAAGGCA
CTGCAACAGTCCTTAGAGAAAAAGAAAACTGTCGATGCACTATTATCATCTGATGACCGG
TACAGAAGGTTGACTAGGGAAGAAATTGCGGTTGCAACTGATAACTTTTCCGAGTCCAAG
ATAATTGGTGAAGGGGCATATGGGAAAGTTTACAAAGGCGATCTTGATCATACTCCTGTT
GCCATCAAAGTTCTTTGTTCTGACGCATCCGAAAAGAAAGAGGAATTTCTAAGAGAGGTG
GAGGTTCTTAGCCAGTTACATCATCCACACATTGTTTTACTGCTTGGAGCCTGTCCTGAA
AATGGTTGTCTTGTTTATGAGTATATGGAGAACGGAAGCCTGGAAGATTGCATTTTGGAA
CGGAACAGCAAACTATTTCCTTGGTTTTTTCGATTCAGGATACTTTTTGAAGTGGCATGC
GCTCTTGCATTCTTGCACAACTCAAAGCCTGAGCCTATTGTTCATCGAGATCTAAAACCA
GGAAATATATTGCTGGACAAAAATTTCGTGAGCAAAATAGGAGATGTAGGTCTAGCAAAA
ATTATATCAGATATTGTCCCAGAAAGTGTTACAGAATATAGGAACTCTGTTCTCGCTGGC
ACCCTTGGTTACATGGATCCAGAGTATCAAAGAACTGGCACACTCAGGCCAAAGTCTGAT
CTTTATGCTTTTGGAATAATAACACTCCAATTACTGGCTGCTTGTCGTCCTAATGGCCTT
ATAATGATGTTTGAAGATGCTATAAATAGTAATTCATTGGTTGATATACTTGATAAGTCA
GTTCCTGACTGGCCATTAATTGAAGCAGAGGAGCTTGCTAGGATGGCGCTAAAATGCTGT
AACCTTAGATGTCGAGATAGACCAGACCTCGAGACTGAAGTTCTTCCACTTTTGAAGAGA
CTTTCTGAATTTGCTGACATGCTTACCAAGGTGGAGAAGAACCTTATACAGGCACCTAGT
CCGTACTTATGCCCAATCGTTCAGGAAGTAATGGAAGATCCACAGATAGCAGCTGATGGT
TTTACATATGAGCATAGAGCAATAAAGTTATGGCTCACCAGACATAGTGTATCACCAGTG
ACAAAACAGTTACTGCAGCACCAGCTGGTCACACCAAATCGCACATTGCGACTAGCTATA
CAAGAGTGGCGATCACAGGTAACGTCGTTCAGAACCAGACCATGA

Peptide Sequence

PEP ID

XP_016467033.1
PEP Infomation

PREDICTED: U-box domain-containing protein 34-like isoform X3 [Nicotiana tabacum]
Sequence

MEDKRAQCEEIFIPFKILCKRKNVETLVLEGNNPATVLLKYVNDSGIKSLVLGSYSPNYF
SRKLKGSSVPSIILKHAPECCDVYVVSSNKLMTNSLNPLLATEGDLPTINKQKSSASSAS
IDGVSHSRSSSLASSHLNFPAFVDGNSSNYVTPQHRPNRNLENVTTGLEAVKGCHSSTYS
EQLDIQEEVERVRLELQTTLAMYNQTCEDLIHTRNKVQLFSSQYLEESGKVNAAKKREEN
LRKIAAEEKEKHIEAEKEVETARKLLSEETYERQIAELKALQQSLEKKKTVDALLSSDDR
YRRLTREEIAVATDNFSESKIIGEGAYGKVYKGDLDHTPVAIKVLCSDASEKKEEFLREV
EVLSQLHHPHIVLLLGACPENGCLVYEYMENGSLEDCILERNSKLFPWFFRFRILFEVAC
ALAFLHNSKPEPIVHRDLKPGNILLDKNFVSKIGDVGLAKIISDIVPESVTEYRNSVLAG
TLGYMDPEYQRTGTLRPKSDLYAFGIITLQLLAACRPNGLIMMFEDAINSNSLVDILDKS
VPDWPLIEAEELARMALKCCNLRCRDRPDLETEVLPLLKRLSEFADMLTKVEKNLIQAPS
PYLCPIVQEVMEDPQIAADGFTYEHRAIKLWLTRHSVSPVTKQLLQHQLVTPNRTLRLAI
QEWRSQVTSFRTRP

Transcript Sequence

Gene sequence data has not been registered.